Organoid & primary cell culture
I isolate intestinal crypts and grow organoids in Matrigel using WENR/ENR media and growth-factor supplements. I also run clonogenic assays with isolated intestinal stem cells and Paneth cells to study regeneration and cellular plasticity.
Fluorescence-activated cell sorting
I use Sox9EGFP and cell identity to sort intestinal epithelial populations. I then use the sorted cells in clonogenic cultures to study stem-cell behavior and Paneth-cell dedifferentiation.
Immunofluorescence & tissue imaging
I plan and run immunofluorescence experiments on intestinal tissue, from cryosectioning and antigen retrieval to staining, imaging, and analysis. Markers I have worked with include CHGA, MUC2, DCAMKL1, and lysozyme.
HCR RNA-FISH
I use HCR fluorescence in situ hybridization to see where RNA is expressed in intestinal epithelial tissue and cell models.
Mouse intestinal tissue processing
I dissect and prepare mouse intestinal tissue, cut cryosections, and analyze tissue from genetically engineered models of intestinal stem-cell injury and regeneration.
Quantitative microscopy & analysis
I use fluorescence images to measure cell counts, cell locations, and marker expression in intestinal and neural tissue. My work has also included measuring amyloid-β accumulation and microglial responses.
Experimental design & data analysis
I organize data by experimental replicate, run statistical comparisons, and interpret the results in the context of the experiment.
Genetic evidence curation
Through ClinGen, I review published evidence on GRIN1, GRIN2A, and GRIN2B variants for gene-disease validity assessment and clinical interpretation.